Ndhlovu LC, Bendall ML, Dwaraka V, Pang AP, Dopkins N, Carreras N, Smith R, Nixon DF, Corley MJ. Retroelement-Age Clocks: Epigenetic Age Captured by Human Endogenous Retrovirus and LINE-1 DNA methylation states. bioRxiv [Preprint]. 2023 Dec 7:2023.12.06.570422. doi: 10.1101/2023.12.06.570422. PMID: 38106164; PMCID: PMC10723416
Archives: Publications
Publications
Protocol for an in vitro assay to study HIV-1 Tat methylation
Boehm D, Kaehlcke K, Schnoelzer M, Ott M. Protocol for an in vitro assay to study HIV-1 Tat methylation. STAR Protoc. 2023 Nov 17;4(4):102687. doi: 10.1016/j.xpro.2023.102687. Epub ahead of print. PMID: 37979180; PMCID: PMC10694577.
HIV-1 Remission: Accelerating the Path to Permanent HIV-1 Silencing
Lyons, D.E.; Kumar, P.; Roan, N.R.; Defechereux, P.A.; Feschotte, C.; Lange, U.C.; Murthy, N.; Sameshima, P.; Verdin, E.; Ake, J.A.; Furler O’Brien, R.; et al. HIV-1 Remission: Accelerating the Path to Permanent HIV-1 Silencing. Viruses 2023, 15, 2171. https://doi.org/10.3390/v15112171
The latent HIV reservoir: current advances in genetic sequencing approaches
Preeti Moar, Thomas A. Premeaux, Andrew Atkins, Lishomwa C. Ndhlovu and Vinayaka R. Prasad
Identification of system-level features in HIV migration within a host
Goyal R, De Gruttola V, Gianella S, Caballero G, Porrachia M, Ignacio C, Woodworth B, Smith DM, Chaillon A. Identification of system-level features in HIV migration within a host. PLoS One. 2023 Sep 26;18(9):e0291367. doi: 10.1371/journal.pone.0291367. PMID: 37751407; PMCID: PMC10521982.
Exploiting a rodent cell block for intrinsic resistance to HIV-1 gene expression in human T cells
Cell-type specific impact of metformin on monocyte epigenetic age reversal in virally suppressed older people living with HIV
Corley MJ, Pang APS, Shikuma CM, Ndhlovu LC. Cell-type specific impact of metformin on monocyte epigenetic age reversal in virally suppressed older people living with HIV. Aging Cell. 2023 Sep 7:e13926. doi: 10.1111/acel.13926. Epub ahead of print. PMID: 37675817.
Comprehensive synergy mapping links a BAF- and NSL-containing “supercomplex” to the transcriptional silencing of HIV-1
Li Z, Deeks SG, Ott M, Greene WC. Comprehensive synergy mapping links a BAF- and NSL-containing “supercomplex” to the transcriptional silencing of HIV-1. Cell Rep. 2023 Sep 26;42(9):113055. doi: 10.1016/j.celrep.2023.113055. Epub 2023 Sep 7. PMID: 37682714; PMCID: PMC10591912.
Beyond the Syndemic of Opioid Use Disorders and HIV: The Impact of Opioids on Viral Reservoirs
Trunfio M, Chaillon A, Beliakova-Bethell N, Deiss R, Letendre SL, Riggs PK, Higgins N, Gianella S. Beyond the Syndemic of Opioid Use Disorders and HIV: The Impact of Opioids on Viral Reservoirs. Viruses. 2023 Aug 9;15(8):1712. doi: 10.3390/v15081712. PMID: 37632053; PMCID: PMC10458944.
Increasing the meaningful involvement of women in HIV cure-related research: a qualitative interview study in the United States
Dubé K, Barr E, Philbin M, Perez-Brumer A, Minalga B, Peterson B, Averitt D, Picou B, Martel K, Chung C, Mejía M, Cameron M, Graham G, Dee L, Dixon Diallo D, Gordon E, Korolkova A, Dyer T, Auerbach JD, Scully E, Dong KL, Gianella S. Increasing the meaningful involvement of women in HIV cure-related research: a qualitative interview study in the United States. HIV Res Clin Pract. 2023 Aug 8;24(1):2246717. PMID: 37608645; PMCID: PMC10454980.